OpenGT
Getting Started
Installation
Tutorial
Modules
opengt.config
opengt.loader
opengt.encoder
opengt.layer
opengt.head
opengt.network
OpenGT
Index
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
A
add_conv_relational_bias() (in module opengt.layer.nodeformer_layer)
add_graph_token() (in module opengt.encoder.graphormer_encoder)
aggregate() (opengt.layer.gatedgcn_layer.GatedGCNLayer method)
APPNP (class in opengt.layer.appnp_layer)
ASTEdgeEncoder (class in opengt.encoder.ast_encoder)
ASTNodeEncoder (class in opengt.encoder.ast_encoder)
B
BGA (class in opengt.network.bga_model)
BGALayer (class in opengt.layer.bga_layer)
BigBird (class in opengt.network.big_bird)
C
CoBFormer (class in opengt.network.cobformer)
compute_posenc_stats() (in module opengt.transform.posenc_stats)
concat_node_encoders() (in module opengt.encoder.composed_encoders)
custom_eigh() (in module opengt.transform.posenc_stats)
CustomGNN (class in opengt.network.custom_gnn)
D
DeGTA (class in opengt.network.degta_model)
DeGTAConv (class in opengt.layer.degta_layer)
DIFFormer (class in opengt.network.difformer)
E
eigvec_normalizer() (in module opengt.transform.posenc_stats)
ElstaticSENodeEncoder (class in opengt.encoder.kernel_pos_encoder)
EquivStableLapPENodeEncoder (class in opengt.encoder.equivstable_laplace_pos_encoder)
EREdgeEncoder (class in opengt.encoder.ER_edge_encoder)
ERNodeEncoder (class in opengt.encoder.ER_node_encoder)
ETransformer (class in opengt.layer.ETransformer)
ExpanderEdgeFixer (class in opengt.encoder.exp_edge_fixer)
ExphormerAttention (class in opengt.layer.Exphormer)
ExphormerFullLayer (class in opengt.layer.Exphormer)
extra_repr() (opengt.layer.gps_layer.GPSLayer method)
(opengt.layer.multi_model_layer.MultiLayer method)
(opengt.layer.multi_model_layer.SingleLayer method)
F
FeatureEncoder (class in opengt.encoder.feature_encoder)
(class in opengt.network.multi_model)
FFN (class in opengt.layer.bga_layer)
full_edge_index() (in module opengt.encoder.rrwp_encoder)
G
GatedGCNGraphGymLayer (class in opengt.layer.gatedgcn_layer)
GatedGCNLayer (class in opengt.layer.gatedgcn_layer)
get_electrostatic_function_encoding() (in module opengt.transform.posenc_stats)
get_heat_kernels() (in module opengt.transform.posenc_stats)
get_heat_kernels_diag() (in module opengt.transform.posenc_stats)
get_lap_decomp_stats() (in module opengt.transform.posenc_stats)
get_rw_landing_probs() (in module opengt.transform.posenc_stats)
GINDeepSigns (class in opengt.encoder.signnet_pos_encoder)
GINEConvESLapPE (class in opengt.layer.gine_conv_layer)
GINEConvGraphGymLayer (class in opengt.layer.gine_conv_layer)
GINEConvLayer (class in opengt.layer.gine_conv_layer)
GNNInductiveEdgeHead (class in opengt.head.inductive_edge)
GNNInductiveNodeHead (class in opengt.head.inductive_node)
GPSLayer (class in opengt.layer.gps_layer)
GPSModel (class in opengt.network.gps_model)
GraphMLPMixer (class in opengt.network.mlp_mixer)
GraphormerHead (class in opengt.head.graphormer_graph)
GraphormerLayer (class in opengt.layer.graphormer_layer)
GraphormerModel (class in opengt.network.graphormer)
Graphtransformer (class in opengt.network.graphtransformer)
GritTransformer (class in opengt.network.grit_model)
GritTransformerLayer (class in opengt.layer.grit_layer)
H
HKdiagSENodeEncoder (class in opengt.encoder.kernel_pos_encoder)
I
InferLinksHead (class in opengt.head.infer_links)
K
kernelized_gumbel_softmax() (in module opengt.layer.nodeformer_layer)
kernelized_softmax() (in module opengt.layer.nodeformer_layer)
KernelPENodeEncoder (class in opengt.encoder.kernel_pos_encoder)
L
LapPENodeEncoder (class in opengt.encoder.laplace_pos_encoder)
LinearEdgeEncoder (class in opengt.encoder.linear_edge_encoder)
LinearNodeEncoder (class in opengt.encoder.linear_node_encoder)
load_dataset_master() (in module opengt.loader.master_loader)
M
MaskedGINDeepSigns (class in opengt.encoder.signnet_pos_encoder)
message() (opengt.layer.gatedgcn_layer.GatedGCNLayer method)
(opengt.layer.gine_conv_layer.GINEConvESLapPE method)
MLPMixer (class in opengt.layer.mlp_mixer)
MLPMixerGraphHead (class in opengt.head.mlp_mixer_graph)
module
opengt.config.data_preprocess_config
opengt.config.defaults_config
opengt.config.gt_config
opengt.encoder.ast_encoder
opengt.encoder.composed_encoders
opengt.encoder.equivstable_laplace_pos_encoder
opengt.encoder.ER_edge_encoder
opengt.encoder.ER_node_encoder
opengt.encoder.exp_edge_fixer
opengt.encoder.feature_encoder
opengt.encoder.graphormer_encoder
opengt.encoder.kernel_pos_encoder
opengt.encoder.laplace_pos_encoder
opengt.encoder.linear_edge_encoder
opengt.encoder.linear_node_encoder
opengt.encoder.ppa_encoder
opengt.encoder.rrwp_encoder
opengt.encoder.signnet_pos_encoder
opengt.encoder.sine_encoder
opengt.encoder.spd_encoder
opengt.encoder.type_dict_encoder
opengt.encoder.voc_superpixels_encoder
opengt.encoder.wl_encoder
opengt.head.graphormer_graph
opengt.head.inductive_edge
opengt.head.inductive_node
opengt.head.infer_links
opengt.head.mlp_mixer_graph
opengt.head.ogb_code_graph
opengt.head.san_graph
opengt.layer.appnp_layer
opengt.layer.bga_layer
opengt.layer.degta_layer
opengt.layer.ETransformer
opengt.layer.Exphormer
opengt.layer.gatedgcn_layer
opengt.layer.gine_conv_layer
opengt.layer.gps_layer
opengt.layer.graphormer_layer
opengt.layer.grit_layer
opengt.layer.mlp_mixer
opengt.layer.multi_model_layer
opengt.layer.nodeformer_layer
opengt.layer.other_attn_layer
opengt.layer.patch_encoder
opengt.layer.san2_layer
opengt.layer.san_layer
opengt.layer.spec_layer
opengt.layer.trans_conv_layer
opengt.loader.master_loader
opengt.network.bga_model
opengt.network.big_bird
opengt.network.cobformer
opengt.network.custom_gnn
opengt.network.degta_model
opengt.network.difformer
opengt.network.gps_model
opengt.network.graphormer
opengt.network.graphtransformer
opengt.network.grit_model
opengt.network.mlp_mixer
opengt.network.multi_model
opengt.network.nodeformer
opengt.network.performer
opengt.network.san_transformer
opengt.network.sgformer
opengt.network.specformer
opengt.network.trans_conv
opengt.transform.posenc_stats
opengt.transform.task_preprocessing
MultiHeadAttention (class in opengt.layer.bga_layer)
MultiHeadAttention2Layer (class in opengt.layer.san2_layer)
MultiHeadAttentionLayer (class in opengt.layer.san_layer)
MultiHeadAttentionLayerGraphormerSparse (class in opengt.layer.other_attn_layer)
MultiHeadAttentionLayerGritSparse (class in opengt.layer.grit_layer)
MultiHeadAttentionLayerSANSparse (class in opengt.layer.other_attn_layer)
MultiLayer (class in opengt.layer.multi_model_layer)
MultiModel (class in opengt.network.multi_model)
N
NodeFormer (class in opengt.network.nodeformer)
NodeFormerConv (class in opengt.layer.nodeformer_layer)
O
OGBCodeGraphHead (class in opengt.head.ogb_code_graph)
opengt.config.data_preprocess_config
module
opengt.config.defaults_config
module
opengt.config.gt_config
module
opengt.encoder.ast_encoder
module
opengt.encoder.composed_encoders
module
opengt.encoder.equivstable_laplace_pos_encoder
module
opengt.encoder.ER_edge_encoder
module
opengt.encoder.ER_node_encoder
module
opengt.encoder.exp_edge_fixer
module
opengt.encoder.feature_encoder
module
opengt.encoder.graphormer_encoder
module
opengt.encoder.kernel_pos_encoder
module
opengt.encoder.laplace_pos_encoder
module
opengt.encoder.linear_edge_encoder
module
opengt.encoder.linear_node_encoder
module
opengt.encoder.ppa_encoder
module
opengt.encoder.rrwp_encoder
module
opengt.encoder.signnet_pos_encoder
module
opengt.encoder.sine_encoder
module
opengt.encoder.spd_encoder
module
opengt.encoder.type_dict_encoder
module
opengt.encoder.voc_superpixels_encoder
module
opengt.encoder.wl_encoder
module
opengt.head.graphormer_graph
module
opengt.head.inductive_edge
module
opengt.head.inductive_node
module
opengt.head.infer_links
module
opengt.head.mlp_mixer_graph
module
opengt.head.ogb_code_graph
module
opengt.head.san_graph
module
opengt.layer.appnp_layer
module
opengt.layer.bga_layer
module
opengt.layer.degta_layer
module
opengt.layer.ETransformer
module
opengt.layer.Exphormer
module
opengt.layer.gatedgcn_layer
module
opengt.layer.gine_conv_layer
module
opengt.layer.gps_layer
module
opengt.layer.graphormer_layer
module
opengt.layer.grit_layer
module
opengt.layer.mlp_mixer
module
opengt.layer.multi_model_layer
module
opengt.layer.nodeformer_layer
module
opengt.layer.other_attn_layer
module
opengt.layer.patch_encoder
module
opengt.layer.san2_layer
module
opengt.layer.san_layer
module
opengt.layer.spec_layer
module
opengt.layer.trans_conv_layer
module
opengt.loader.master_loader
module
opengt.network.bga_model
module
opengt.network.big_bird
module
opengt.network.cobformer
module
opengt.network.custom_gnn
module
opengt.network.degta_model
module
opengt.network.difformer
module
opengt.network.gps_model
module
opengt.network.graphormer
module
opengt.network.graphtransformer
module
opengt.network.grit_model
module
opengt.network.mlp_mixer
module
opengt.network.multi_model
module
opengt.network.nodeformer
module
opengt.network.performer
module
opengt.network.san_transformer
module
opengt.network.sgformer
module
opengt.network.specformer
module
opengt.network.trans_conv
module
opengt.transform.posenc_stats
module
opengt.transform.task_preprocessing
module
overwrite_defaults_cfg() (in module opengt.config.defaults_config)
P
PadToFullGraphEdgeEncoder (class in opengt.encoder.rrwp_encoder)
PatchEncoder (class in opengt.layer.patch_encoder)
Performer (class in opengt.network.performer)
PPAEdgeEncoder (class in opengt.encoder.ppa_encoder)
PPANodeEncoder (class in opengt.encoder.ppa_encoder)
pyg_softmax() (in module opengt.layer.grit_layer)
(in module opengt.layer.other_attn_layer)
(in module opengt.layer.san2_layer)
R
reset_parameters() (opengt.layer.gine_conv_layer.GINEConvESLapPE method)
RRWPLinearEdgeEncoder (class in opengt.encoder.rrwp_encoder)
RRWPLinearEdgeMaskedEncoder (class in opengt.encoder.rrwp_encoder)
RRWPLinearNodeEncoder (class in opengt.encoder.rrwp_encoder)
RWSENodeEncoder (class in opengt.encoder.kernel_pos_encoder)
S
SAN2Layer (class in opengt.layer.san2_layer)
SANGraphHead (class in opengt.head.san_graph)
SANLayer (class in opengt.layer.san_layer)
SANTransformer (class in opengt.network.san_transformer)
ScaledDotProductAttention (class in opengt.layer.bga_layer)
set_cfg_gt() (in module opengt.config.gt_config)
set_cfg_preprocess() (in module opengt.config.data_preprocess_config)
SGFormer (class in opengt.network.sgformer)
SignNetNodeEncoder (class in opengt.encoder.signnet_pos_encoder)
SineEncoder (class in opengt.encoder.sine_encoder)
SingleLayer (class in opengt.layer.multi_model_layer)
SingleModel (class in opengt.network.multi_model)
SPDEdgeEncoder (class in opengt.encoder.spd_encoder)
SpecFormer (class in opengt.network.specformer)
SpecLayer (class in opengt.layer.spec_layer)
T
task_specific_preprocessing() (in module opengt.transform.task_preprocessing)
TransConv (class in opengt.network.trans_conv)
TransConvLayer (class in opengt.layer.trans_conv_layer)
TypeDictEdgeEncoder (class in opengt.encoder.type_dict_encoder)
TypeDictNodeEncoder (class in opengt.encoder.type_dict_encoder)
U
update() (opengt.layer.gatedgcn_layer.GatedGCNLayer method)
V
VOCEdgeEncoder (class in opengt.encoder.voc_superpixels_encoder)
VOCNodeEncoder (class in opengt.encoder.voc_superpixels_encoder)
W
WLSENodeEncoder (class in opengt.encoder.wl_encoder)